Abstract:
To detect the amount of
Ralstonia solanacearum in tobacco planting soil before bacterial wilt occurrence and effectively control tobacco bacterial wilt, locked nucleic acid-based (LNA-based) quantitative real-time PCR assay was established and used in this study. Taking
cytochrome c gene (NCBI Genbank accession number:WP_011002214.1) from
Ralstonia solanacearum as the target, its primer sequence covering the target fragment was synthesized with LNA technique. Quantitative real-time PCR was used to quickly detect the amount of
Ralstonia solanacearum in tobacco planting soil. The results showed that the standard curve of
cytochrome c gene had a good correlation with
R2 > 0.99. Comparing with conventional DNA primers, LNA primer of
cytochrome c gene could increase annealing temperature of PCR reaction and amplification efficiency. The DNA of 18 soil samples from tobacco fields (paddy soil) infected with bacterial wilt were tested and the amount of
Ralstonia solanacearum in per gram of soil was 2.52×10
4-1.88×10
7. Therefore, LNA-based quantitative real-time PCR assay is suitable for the quantitative determination of
Ralstonia solanacearum in paddy soil, and the early detection of tobacco soil will contribute to the forecast of tobacco bacterial wilt.