Abstract:
To clarify the functions of 3-
dehydroquinate dehydratase and shikimate dehydrogenase(
DHQ-SDH) genes in
Nicotiana tabacum, At
DHQ-SDHs sequences were used to blast in China Tobacco Genome Database and
NtDHQ-SDHs were obtained. Gene structure, protein characteristics,
cis-regulatory elements and phylogenetic relationships were analyzed by bioinformatics software. Relative expression levels of
NtDHQ-SDHs in different tissues of cv. Honghuadajinyuan were detected by qPCR. The results showed that eight
NtDHQ-SDHs were identified. The coding region sequences of eight
NtDHQ-SDHs were 1 248-1 608 bp in lengths and encoded 415-535 amino acids. The molecular weights of eight
NtDHQ-SDHs were 45.13-58.22 kD and the predicted
NtDHQ-SDHs were stable proteins. The number of exons and introns in
NtDHQ-SDHs were relatively conserved, including 8-10 exons and 7-9 introns. Motif composition and phylogenetic analysis indicated that eight
NtDHQ-SDHs were divided into two subfamilies, deriving from
N. sylvestris and
N. tomentosiformis, respectively.
NtDHQ-SDHs were expressed in roots, stems, leaves and terminal buds.