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烟草黄酮醇合酶基因(NtFLS)的生物信息学及表达模式分析

Bioinformatics and expression patterns of flavonol synthase genes (NtFLS) in tobacco

  • 摘要: 为探究烟草黄酮醇合酶(Flavonol synthase,FLS)基因的生物学功能,从普通烟草K326中鉴定了NtFLS基因家族成员,并进行了基因结构、系统进化、蛋白结构等生物信息学分析,分析了NtFLS所有成员在烟草不同组织中的表达模式,以及NtFLS1NtFLS2基因在不同激素和非生物胁迫条件下的表达水平。结果表明:①普通烟草基因组中含有9个NtFLS基因,其编码蛋白均含有2OG-FeII_Oxy和DIOX_N保守结构域,属于双加氧酶(2-oxoglutarate dependent dioxygenase, 2-ODD)超家族。其中,NtFLS1和NtFLS2蛋白含有FLS家族的特异性序列,且分别与绒毛状烟草NtomFLS和林烟草NsylFLS亲缘关系较近。②在烟草盛花期不同组织中,NtFLS1NtFLS2基因的表达水平均明显高于其他7个NtFLS基因,且在花蕾、雄蕊和雌蕊中表达水平较高,表明NtFLS1NtFLS2具有较高的转录活性,可能在烟草雄蕊和雌蕊发育过程中发挥重要的调控作用。③NtFLS基因启动子中含有多个激素和非生物胁迫响应元件,且NtFLS1NtFLS2基因的表达受多种激素和非生物胁迫的显著调控,表明NtFLS1和NtFLS2蛋白可能参与调控烟草对激素与非生物胁迫的响应。

     

    Abstract: To investigate the biological function of flavonol synthase (FLS) genes in tobacco, members of the NtFLS gene family were identified from common tobacco variety K326, and bioinformatic analyses of gene structure, phylogenetic evolution, protein structure, etc. were performed. At the same time, the expression patterns of all NtFLS members in different tissues of tobacco were determined, as well as the expression levels of NtFLS1 and NtFLS2 genes under different hormonal and abiotic stress conditions. The results showed that: 1) The common K326 tobacco genome contained 9 NtFLS genes, all of which encode proteins with conserved 2OG-FeII_Oxy and DIOX_N domains belonging to the 2-oxoglutarate-dependent dioxygenase (2-ODD) superfamily. Among them, NtFLS1 and NtFLS2 proteins contained specific sequences of the FLS family and were closely related to NtomFLS in Nicotiana tomentosiformis and NsylFLS in Nicotiana sylvestris, respectively. 2) During the flowering stage, the expression levels of NtFLS1 and NtFLS2 genes in different tissues were significantly higher than those of the other 7 NtFLS genes, and showed higher expression levels in buds, stamens, and pistils, indicating that NtFLS1 and NtFLS2 had higher transcriptional activity and might play important regulatory roles in the development process of tobacco stamens and pistils. 3) The promoters of NtFLS genes contained multiple hormone and abiotic stress response elements, and the expressions of NtFLS1 and NtFLS2 genes were significantly regulated by multiple hormones and abiotic stress, indicating that NtFLS1 and NtFLS2 might be involved in regulating the response of tobacco to hormones and abiotic stress.

     

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